The issue has been SOLVED. Car was running fine for dealer once they got it charged up again (aaaargh) but after a lot of sleuthing it was chased down to a chafed wiring harness. The dealer's service Dept was great. They kept looking through service bulletins and checking them out until they found this one. Harness was replaced and relocated and car is again running great, just like it never had a stroke :). Repair was fully covered under hybrid parts warranty which was a good thing since I was 72 miles over the 36k standard warranty. Wouldn't hurst for any other 2014 Fusion Hybrid and Energi owners to have this harness checked out next time it is in for service, because I can tell you the issue was NOT pretty to see or deal with!